1. Yes - obviously pa yp al will see that 2 different payment "reasons" are coming in therefore will see that 2 separate stores exist. What they plan to do with you will depend on their decisions and your operations.
2. I am sure that they will - maybe if your registration info is different, you can get by but any other manner that "could" flag your account. Again, depends on what you are up to.
BUT, if you do online e-commerce stores, search for other payment processors that accept credit cards, pa yp al, ale rtp ay, etc. - much better.
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