keep them separate for obvious reasons, if one goes down the others won't.
Personally i would use something like e-junkie so paypal don't know what website the payments are coming from, so if a paypal gets limited you can add another to the same site without PP knowing.
If you don't then if the paypal gets limited that is tied to the site, you will not be able to add another paypal, you would then have to use somthing like 2co or ccnow to take payments.
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